NeoPZ
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Implements a skyline storage format to parallelized process. Matrix. More...
#include <pzskylmatpar.h>
Public Member Functions | |
TPZSkylParMatrix () | |
Default constructor. More... | |
TPZSkylParMatrix (const int64_t dim) | |
Constructor for given dimension. More... | |
TPZSkylParMatrix (const int64_t dim, const TPZVec< int64_t > &skyline, int NumThreads) | |
Constructor with number of threads. More... | |
TPZSkylParMatrix (const TPZSkylParMatrix< TVar > &A) | |
Copy constructor. More... | |
virtual | ~TPZSkylParMatrix () |
Default destructor. More... | |
int | ClassId () const override |
Define the class id associated with the class. More... | |
Parallel procedure using pthreads | |
Implement all data structure used in procedure. | |
int | Decompose_Cholesky (std::list< int64_t > &singular) override |
Decomposes the current matrix using Cholesky method. More... | |
int | Decompose_Cholesky () override |
Decomposes the current matrix using Cholesky method. The current matrix has to be symmetric. More... | |
int | Decompose_LDLt (std::list< int64_t > &singular) override |
Decomposes the current matrix using LDLt. The current matrix has to be symmetric. "L" is lower triangular with 1.0 in its diagonal and "D" is a Diagonal matrix. More... | |
int | Decompose_LDLt () override |
Decomposes the current matrix using LDLt. More... | |
void | SetSkyline (const TPZVec< int64_t > &skyline) |
Public Member Functions inherited from TPZSkylMatrix< TVar > | |
TPZSkylMatrix () | |
TPZSkylMatrix (const int64_t dim) | |
TPZSkylMatrix (const int64_t dim, const TPZVec< int64_t > &skyline) | |
Construct a skyline matrix of dimension dim skyline indicates the minimum row number which will be accessed by each equation. More... | |
TPZSkylMatrix (const TPZSkylMatrix< TVar > &A) | |
virtual int64_t | MemoryFootprint () const override |
Returns the approximate size of the memory footprint (amount of memory required to store this object). More... | |
void | SetSkyline (const TPZVec< int64_t > &skyline) |
modify the skyline of the matrix, throwing away its values skyline indicates the minimum row number which will be accessed by each equation More... | |
int64_t | SkyHeight (int64_t col) |
return the height of the skyline for a given column More... | |
void | AddSameStruct (TPZSkylMatrix< TVar > &B, double k=1.) |
Add a skyline matrix B with same structure of this It makes this += k * B. More... | |
virtual int | IsSimetric () const override |
declare the object as simetric matrix More... | |
virtual | ~TPZSkylMatrix () |
destructor of the skyline matrix More... | |
virtual void | UpdateFrom (TPZAutoPointer< TPZMatrix< TVar > > mat) override |
Updates the values of the matrix based on the values of the matrix. More... | |
template<class TVar2 > | |
void | CopyFrom (TPZSkylMatrix< TVar2 > &orig) |
copy the values from a matrix with a different precision More... | |
int | PutVal (const int64_t row, const int64_t col, const TVar &element) override |
Put values without bounds checking This method is faster than "Put" if DEBUG is defined. More... | |
const TVar & | GetVal (const int64_t row, const int64_t col) const override |
Get values without bounds checking This method is faster than "Get" if DEBUG is defined. More... | |
TVar & | operator() (const int64_t row, const int64_t col) |
virtual TVar & | s (const int64_t row, const int64_t col) override |
The operators check on the bounds if the DEBUG variable is defined. More... | |
TVar & | operator() (const int64_t row) |
virtual void | MultAdd (const TPZFMatrix< TVar > &x, const TPZFMatrix< TVar > &y, TPZFMatrix< TVar > &z, const TVar alpha, const TVar beta, const int opt=0) const override |
It computes z = beta * y + alpha * opt(this)*x but z and x can not overlap in memory. More... | |
TPZSkylMatrix & | operator= (const TPZSkylMatrix< TVar > &A) |
TPZSkylMatrix | operator+ (const TPZSkylMatrix< TVar > &A) const |
TPZSkylMatrix | operator- (const TPZSkylMatrix< TVar > &A) const |
TPZSkylMatrix & | operator+= (const TPZSkylMatrix< TVar > &A) |
TPZSkylMatrix & | operator-= (const TPZSkylMatrix< TVar > &A) |
TPZSkylMatrix | operator* (const TVar v) const |
TPZSkylMatrix & | operator*= (TVar value) |
TPZSkylMatrix | operator- () const |
int | Resize (const int64_t newDim, const int64_t) override |
Redimensions a matriz keeping the previous values. More... | |
int | Redim (const int64_t newDim, const int64_t) override |
Redimensions the matrix reinitializing it with zero. More... | |
int | Redim (const int64_t newDim) |
int | Zero () override |
Zeroes the matrix. More... | |
void | AddKel (TPZFMatrix< TVar > &elmat, TPZVec< int64_t > &sourceindex, TPZVec< int64_t > &destinationindex) override |
Add a contribution of a stiffness matrix. More... | |
virtual void | AutoFill (int64_t nrow, int64_t ncol, int symmetric) |
void | Read (TPZStream &buf, void *context) override |
Unpacks the object structure from a stream of bytes. More... | |
void | Write (TPZStream &buf, int withclassid) const override |
Packs the object structure in a stream of bytes. More... | |
virtual std::string | ClassName () const |
int64_t | Size (const int64_t column) const |
int64_t | GetNelemts () |
template<> | |
void | AddKel (TPZFMatrix< double > &elmat, TPZVec< int64_t > &source, TPZVec< int64_t > &destination) |
template<> | |
void | AddKel (TPZFMatrix< float > &elmat, TPZVec< int64_t > &source, TPZVec< int64_t > &destination) |
template<> | |
int | Decompose_Cholesky (std::list< int64_t > &singular) |
Decomposes the current matrix using Cholesky method. More... | |
template<> | |
int | Decompose_Cholesky (std::list< int64_t > &singular) |
Decomposes the current matrix using Cholesky method. More... | |
template<> | |
int | Decompose_Cholesky (std::list< int64_t > &singular) |
Decomposes the current matrix using Cholesky method. More... | |
template<> | |
int | Decompose_Cholesky () |
Decomposes the current matrix using Cholesky method. The current matrix has to be symmetric. More... | |
template<> | |
int | Decompose_Cholesky () |
Decomposes the current matrix using Cholesky method. The current matrix has to be symmetric. More... | |
template<> | |
int | Decompose_Cholesky () |
Decomposes the current matrix using Cholesky method. The current matrix has to be symmetric. More... | |
template<> | |
int | Decompose_Cholesky_blk (int64_t blk_sz) |
template<> | |
int | Decompose_Cholesky_blk (int64_t blk_sz) |
template<> | |
int | Decompose_Cholesky_blk (int64_t blk_sz) |
virtual void | SolveSOR (int64_t &numiterations, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, TPZFMatrix< TVar > &scratch, const REAL overrelax, REAL &tol, const int FromCurrent=0, const int direction=1) override |
Solves the linear system using Successive Over Relaxation method (Gauss Seidel). . More... | |
int | Decompose_Cholesky_blk (int64_t blk_sz) |
int | Subst_Forward (TPZFMatrix< TVar > *b) const override |
Computes B = Y, where A*Y = B, A is lower triangular. More... | |
int | Subst_Backward (TPZFMatrix< TVar > *b) const override |
Computes B = Y, where A*Y = B, A is upper triangular. More... | |
int | Subst_LForward (TPZFMatrix< TVar > *b) const override |
Computes B = Y, where A*Y = B, A is lower triangular with A(i,i)=1. More... | |
int | Subst_LBackward (TPZFMatrix< TVar > *b) const override |
Computes B = Y, where A*Y = B, A is upper triangular with A(i,i)=1. More... | |
int | Subst_Diag (TPZFMatrix< TVar > *b) const override |
Computes B = Y, where A*Y = B, A is diagonal matrix. More... | |
Public Member Functions inherited from TPZMatrix< TVar > | |
TPZMatrix () | |
Simple constructor. More... | |
TPZMatrix (const TPZMatrix< TVar > &cp) | |
virtual | ~TPZMatrix () |
Simple destructor. More... | |
virtual TPZMatrix< TVar > * | Clone () const =0 |
template<class TVar2 > | |
void | CopyFrom (TPZMatrix< TVar2 > ©) |
void | AutoFill (int64_t nrow, int64_t ncol, int symmetric) |
Fill matrix storage with randomic values. More... | |
virtual int | VerifySymmetry (REAL tol=1.e-13) const |
Checks if current matrix value is symmetric. More... | |
virtual int | Put (const int64_t row, const int64_t col, const TVar &value) |
Put values with bounds checking if DEBUG variable is defined. More... | |
virtual const TVar & | Get (const int64_t row, const int64_t col) const |
Get value with bound checking. More... | |
const TVar & | g (const int64_t row, const int64_t col) const |
Substitution for the () operator when const arguments are needed. More... | |
TVar & | operator() (const int64_t row, const int64_t col) |
The operators check on the bounds if the DEBUG variable is defined. More... | |
TVar & | operator() (const int64_t row) |
The operators check on the bounds if the DEBUG variable is defined. More... | |
virtual void | AddKel (TPZFMatrix< TVar > &elmat, TPZVec< int64_t > &destinationindex) |
Add a contribution of a stiffness matrix. More... | |
void | SetIsDecomposed (int val) |
Sets current matrix to decomposed state. More... | |
virtual bool | Compare (TPZSavable *copy, bool override=false) override |
Compare the object for identity with the object pointed to, eventually copy the object. More... | |
virtual bool | Compare (TPZSavable *copy, bool override=false) const override |
Compare the object for identity with the object pointed to, eventually copy the object. More... | |
virtual void | GetSub (const TPZVec< int64_t > &indices, TPZFMatrix< TVar > &block) const |
Extract the block indicated by the indices from the matrix. More... | |
bool | CompareValues (TPZMatrix< TVar > &M, TVar tol) |
Compare values of this to B, with a precision tolerance tol. More... | |
template<> | |
void | Print (const char *name, std::ostream &out, const MatrixOutputFormat form) const |
template<> | |
void | Print (const char *name, std::ostream &out, const MatrixOutputFormat form) const |
template<> | |
void | Print (const char *name, std::ostream &out, const MatrixOutputFormat form) const |
template<> | |
void | SolveCG (int64_t &numiterations, TPZSolver< std::complex< float > > &preconditioner, const TPZFMatrix< std::complex< float > > &F, TPZFMatrix< std::complex< float > > &result, TPZFMatrix< std::complex< float > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveCG (int64_t &numiterations, TPZSolver< std::complex< double > > &preconditioner, const TPZFMatrix< std::complex< double > > &F, TPZFMatrix< std::complex< double > > &result, TPZFMatrix< std::complex< double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveCG (int64_t &numiterations, TPZSolver< std::complex< long double > > &preconditioner, const TPZFMatrix< std::complex< long double > > &F, TPZFMatrix< std::complex< long double > > &result, TPZFMatrix< std::complex< long double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveGMRES (int64_t &numiterations, TPZSolver< std::complex< float > > &preconditioner, TPZFMatrix< std::complex< float > > &H, int &numvectors, const TPZFMatrix< std::complex< float > > &F, TPZFMatrix< std::complex< float > > &result, TPZFMatrix< std::complex< float > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveGMRES (int64_t &numiterations, TPZSolver< std::complex< double > > &preconditioner, TPZFMatrix< std::complex< double > > &H, int &numvectors, const TPZFMatrix< std::complex< double > > &F, TPZFMatrix< std::complex< double > > &result, TPZFMatrix< std::complex< double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveGMRES (int64_t &numiterations, TPZSolver< std::complex< long double > > &preconditioner, TPZFMatrix< std::complex< long double > > &H, int &numvectors, const TPZFMatrix< std::complex< long double > > &F, TPZFMatrix< std::complex< long double > > &result, TPZFMatrix< std::complex< long double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveBICG (int64_t &numiterations, TPZSolver< std::complex< float > > &preconditioner, const TPZFMatrix< std::complex< float > > &F, TPZFMatrix< std::complex< float > > &result, REAL &tol) |
template<> | |
void | SolveBICG (int64_t &numiterations, TPZSolver< std::complex< double > > &preconditioner, const TPZFMatrix< std::complex< double > > &F, TPZFMatrix< std::complex< double > > &result, REAL &tol) |
template<> | |
void | SolveBICG (int64_t &numiterations, TPZSolver< std::complex< long double > > &preconditioner, const TPZFMatrix< std::complex< long double > > &F, TPZFMatrix< std::complex< long double > > &result, REAL &tol) |
template<> | |
void | SolveBICGStab (int64_t &numiterations, TPZSolver< std::complex< float > > &preconditioner, const TPZFMatrix< std::complex< float > > &F, TPZFMatrix< std::complex< float > > &result, TPZFMatrix< std::complex< float > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveBICGStab (int64_t &numiterations, TPZSolver< std::complex< double > > &preconditioner, const TPZFMatrix< std::complex< double > > &F, TPZFMatrix< std::complex< double > > &result, TPZFMatrix< std::complex< double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveBICGStab (int64_t &numiterations, TPZSolver< std::complex< long double > > &preconditioner, const TPZFMatrix< std::complex< long double > > &F, TPZFMatrix< std::complex< long double > > &result, TPZFMatrix< std::complex< long double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveIR (int64_t &numiterations, TPZSolver< std::complex< float > > &preconditioner, const TPZFMatrix< std::complex< float > > &F, TPZFMatrix< std::complex< float > > &result, TPZFMatrix< std::complex< float > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveIR (int64_t &numiterations, TPZSolver< std::complex< double > > &preconditioner, const TPZFMatrix< std::complex< double > > &F, TPZFMatrix< std::complex< double > > &result, TPZFMatrix< std::complex< double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
void | SolveIR (int64_t &numiterations, TPZSolver< std::complex< long double > > &preconditioner, const TPZFMatrix< std::complex< long double > > &F, TPZFMatrix< std::complex< long double > > &result, TPZFMatrix< std::complex< long double > > *residual, REAL &tol, const int FromCurrent) |
template<> | |
bool | SolveEigenvaluesJacobi (int64_t &numiterations, REAL &tol, TPZVec< std::complex< float > > *Sort) |
template<> | |
bool | SolveEigenvaluesJacobi (int64_t &numiterations, REAL &tol, TPZVec< std::complex< double > > *Sort) |
template<> | |
bool | SolveEigenvaluesJacobi (int64_t &numiterations, REAL &tol, TPZVec< std::complex< long double > > *Sort) |
virtual void | Multiply (const TPZFMatrix< TVar > &A, TPZFMatrix< TVar > &res, int opt=0) const |
It mutiplies itself by TPZMatrix<TVar>A putting the result in res. More... | |
virtual void | Add (const TPZMatrix< TVar > &A, TPZMatrix< TVar > &res) const |
It adds itself to TPZMatrix<TVar>A putting the result in res. More... | |
virtual void | Residual (const TPZFMatrix< TVar > &x, const TPZFMatrix< TVar > &rhs, TPZFMatrix< TVar > &res) |
Computes res = rhs - this * x. More... | |
virtual void | Substract (const TPZMatrix< TVar > &A, TPZMatrix< TVar > &result) const |
It substracts A from storing the result in result. More... | |
virtual void | Identity () |
Converts the matrix in an identity matrix. More... | |
virtual void | Transpose (TPZMatrix< TVar > *const T) const |
It makes *T the transpose of current matrix. More... | |
int | Inverse (TPZFMatrix< TVar > &Inv, DecomposeType dec) |
It makes Inv =[this]. IMPORTANT OBSERVATION –> The original matrix (calling object) no is more equal. It containts the some decomposition (LU or Cholesky or ...) More... | |
TVar | MatrixNorm (int p, int64_t numiter=2000000, REAL tol=1.e-10) const |
Computes the matrix norm of this. More... | |
TVar | ConditionNumber (int p, int64_t numiter=2000000, REAL tol=1.e-10) |
Computes the matrix condition number of this. More... | |
virtual int | PutSub (const int64_t sRow, const int64_t sCol, const TPZFMatrix< TVar > &Source) |
It puts submatrix Source on actual matrix structure. More... | |
virtual int | GetSub (const int64_t sRow, const int64_t sCol, const int64_t rowSize, const int64_t colSize, TPZFMatrix< TVar > &Target) const |
Gets submatrix storing it on Target. More... | |
virtual int | AddSub (const int64_t sRow, const int64_t sCol, const TPZFMatrix< TVar > &Source) |
It adds Source matrix on current matrix from position (sRow, sCol) More... | |
virtual int | InsertSub (const int64_t sRow, const int64_t sCol, const int64_t rowSize, const int64_t colSize, const int64_t pRow, const int64_t pCol, TPZMatrix< TVar > *Target) const |
Inserts a submatrix from current object on matrix *Target with no redimentioning. More... | |
virtual int | AddSub (const int64_t sRow, const int64_t sCol, const int64_t rowSize, const int64_t colSize, const int64_t pRow, const int64_t pCol, TPZMatrix< TVar > *pA) const |
Adds a submatrix from current object in *Target. More... | |
int | IsSquare () const |
Checks if current matrix is square. More... | |
virtual void | Simetrize () |
Simetrizes copies upper plan to the lower plan, making its data simetric. More... | |
virtual int | IsDefPositive () const |
Checks if current matrix is definite positive. More... | |
int | IsDecomposed () const |
Checks if current matrix is already decomposed. More... | |
virtual int | Decompose_LU (std::list< int64_t > &singular) |
Decomposes the current matrix using LU decomposition. More... | |
virtual int | Decompose_LU () |
virtual int | Substitution (TPZFMatrix< TVar > *B) const |
Computes Forward and Backward substitution for a "LU" decomposed matrix. More... | |
virtual void | Input (std::istream &in=std::cin) |
Input operation. More... | |
virtual void | Print (std::ostream &out) const |
virtual void | Print (const char *name, std::ostream &out=std::cout, const MatrixOutputFormat form=EFormatted) const |
It prints the matrix data in a MatrixFormat Rows X Cols. More... | |
int64_t | Rows () const |
Returns number of rows. More... | |
int64_t | Cols () const |
Returns number of cols. More... | |
virtual int64_t | Dim () const |
Returns the dimension of the matrix if the matrix is square. More... | |
virtual void | SolveJacobi (int64_t &numiterations, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, TPZFMatrix< TVar > &scratch, REAL &tol, const int FromCurrent=0) |
Solves the linear system using Jacobi method. . More... | |
virtual void | SolveSSOR (int64_t &numiterations, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, TPZFMatrix< TVar > &scratch, const REAL overrelax, REAL &tol, const int FromCurrent=0) |
Solves the linear system using Symmetric Successive Over Relaxation method (Gauss Seidel). . More... | |
virtual void | SolveCG (int64_t &numiterations, TPZSolver< TVar > &preconditioner, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, REAL &tol, const int FromCurrent=0) |
Solves the linear system using Conjugate Gradient method. . More... | |
virtual void | SolveBICG (int64_t &numiterations, TPZSolver< TVar > &preconditioner, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, REAL &tol) |
Solves the linear system using Bi-Conjugate Gradient method. . More... | |
virtual void | SolveBICGStab (int64_t &numiterations, TPZSolver< TVar > &preconditioner, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, REAL &tol, const int FromCurrent=0) |
Solves the linear system using Bi-Conjugate Gradient stabilized method. . More... | |
virtual void | SolveGMRES (int64_t &numiterations, TPZSolver< TVar > &preconditioner, TPZFMatrix< TVar > &H, int &numvectors, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, REAL &tol, const int FromCurrent) |
Solves the linear system using Generalized Minimal Residual (GMRES) method. . More... | |
virtual void | SolveIR (int64_t &numiterations, TPZSolver< TVar > &preconditioner, const TPZFMatrix< TVar > &F, TPZFMatrix< TVar > &result, TPZFMatrix< TVar > *residual, REAL &tol, const int FromCurrent=0) |
Solves the linear system using IR method. . More... | |
virtual bool | SolveEigenvaluesJacobi (int64_t &numiterations, REAL &tol, TPZVec< TVar > *Sort=0) |
Transforms this matrix in a diagonal matrix, where the diagonal values are its eigenvalues. This method is efficient only for small matrices. More... | |
virtual bool | SolveEigensystemJacobi (int64_t &numiterations, REAL &tol, TPZVec< TVar > &Eigenvalues, TPZFMatrix< TVar > &Eigenvectors) const |
Compute Eigenvalues and Eigenvectors of this matrix. This method is efficient only for small matrices. More... | |
virtual int | SolveDirect (TPZFMatrix< TVar > &F, const DecomposeType dt, std::list< int64_t > &singular) |
Solves the linear system using Direct methods. More... | |
virtual int | SolveDirect (TPZFMatrix< TVar > &F, const DecomposeType dt) |
Solves the linear system using Direct methods. More... | |
virtual int | Decompose (const DecomposeType dt, std::list< int64_t > &singular) |
decompose the system of equations acording to the decomposition scheme More... | |
int | Solve_LU (TPZFMatrix< TVar > *B, std::list< int64_t > &singular) |
Solves the linear system using LU method . More... | |
int | Solve_LU (TPZFMatrix< TVar > *B) |
Solves the linear system using LU method . More... | |
virtual int | Solve_Cholesky (TPZFMatrix< TVar > *B) |
Solves the linear system using Cholesky method . More... | |
int | Solve_Cholesky (TPZFMatrix< TVar > *B, std::list< int64_t > &singular) |
Solves the linear system using Cholesky method . More... | |
int | Solve_LDLt (TPZFMatrix< TVar > *B, std::list< int64_t > &singular) |
Solves the linear system using LDLt method . More... | |
int | Solve_LDLt (TPZFMatrix< TVar > *B) |
Solves the linear system using LDLt method . More... | |
Public Member Functions inherited from TPZSavable | |
TPZSavable () | |
virtual | ~TPZSavable () |
virtual std::list< std::map< std::string, uint64_t > > | VersionHistory () const |
virtual std::pair< std::string, uint64_t > | Version () const |
Public Member Functions inherited from TPZRegisterClassId | |
template<typename T > | |
TPZRegisterClassId (int(T::*)() const) | |
TPZRegisterClassId ()=default | |
Static Public Member Functions | |
static int | main () |
Static main for testing. More... | |
static int | main_nada () |
Static Public Member Functions inherited from TPZMatrix< TVar > | |
static int | Error (const char *msg, const char *msg2=0) |
Returns error messages. More... | |
static TVar | ReturnNearestValue (TVar val, TPZVec< TVar > &Vec, TVar tol) |
Retorna o valor mais proximo a "val" (exceto valores no intervalo -tol <= val <= +tol) contido no vetor Vec. More... | |
Static Public Member Functions inherited from TPZSavable | |
static std::set< TPZRestoreClassBase * > & | RestoreClassSet () |
This static function guarantees that the gMap object is available when needed. More... | |
static std::map< int, TPZRestore_t > & | ClassIdMap () |
This static function guarantees that the gMap object is available when needed. More... | |
static std::pair< std::string, uint64_t > | NeoPZVersion () |
static void | Register (TPZRestoreClassBase *restore) |
static void | RegisterClassId (int classid, TPZRestore_t fun) |
static TPZSavable * | CreateInstance (const int &classId) |
Public Attributes | |
TPZVec< int > | fDec |
TPZVec< int64_t > | fSkyline |
Private Member Functions | |
void | ColumnToWork (int64_t &lcol, int64_t &lprevcol) |
Determine which column can be decomposed with respect to which column. More... | |
void | ColumnToWork (int64_t &lcol) |
Determine which column has some equations to decompose. More... | |
void | DecomposeColumnCholesky (int64_t lcol, int64_t lprevcol) |
void | DecomposeColumnLDLt (int64_t lcol, int64_t lprevcol) |
void | DecomposeColumnLDLt2 (int64_t lcol) |
void | PrintState () |
template<> | |
void | DecomposeColumnCholesky (int64_t col, int64_t prevcol) |
Static Private Member Functions | |
static void * | ParallelLDLt (void *t) |
static void * | ParallelLDLt2 (void *t) |
static void * | ParallelCholesky (void *t) |
Private Attributes | |
int64_t | fEqDec |
int64_t | fNthreads |
int * | fThreadUsed |
std::set< int64_t > | fColUsed |
int | fNumDecomposed |
bool | fCorrectSingular |
std::list< int64_t > | fSingular |
Additional Inherited Members | |
Protected Member Functions inherited from TPZSkylMatrix< TVar > | |
TVar * | Diag (int64_t col) |
This method returns a pointer to the diagonal element of the matrix of the col column. More... | |
void | DecomposeColumn (int64_t col, int64_t prevcol) |
void | DecomposeColumn (int64_t col, int64_t prevcol, std::list< int64_t > &singular) |
void | DecomposeColumn2 (int64_t col, int64_t prevcol) |
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void | DecomposeColumn (int64_t col, int64_t prevcol, std::list< int64_t > &singular) |
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void | DecomposeColumn (int64_t col, int64_t prevcol, std::list< int64_t > &singular) |
template<> | |
void | DecomposeColumn (int64_t col, int64_t prevcol, std::list< int64_t > &singular) |
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void | DecomposeColumn2 (int64_t col, int64_t prevcol) |
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void | DecomposeColumn2 (int64_t col, int64_t prevcol) |
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void | DecomposeColumn2 (int64_t col, int64_t prevcol) |
Protected Member Functions inherited from TPZMatrix< TVar > | |
void | PrepareZ (const TPZFMatrix< TVar > &y, TPZFMatrix< TVar > &z, const TVar beta, const int opt) const |
Is an auxiliar method used by MultiplyAdd. More... | |
TPZMatrix (const int64_t row, const int64_t col) | |
Constructor. More... | |
Static Protected Member Functions inherited from TPZMatrix< TVar > | |
static void | Swap (int64_t *a, int64_t *b) |
Swaps contents of a in b and b in a. More... | |
Protected Attributes inherited from TPZSkylMatrix< TVar > | |
TPZVec< TVar * > | fElem |
Storage to keep the first elements to each equation. More... | |
Protected Attributes inherited from TPZMatrix< TVar > | |
int64_t | fRow |
Number of rows in matrix. More... | |
int64_t | fCol |
Number of cols in matrix. More... | |
char | fDecomposed |
Decomposition type used to decompose the current matrix. More... | |
char | fDefPositive |
Definite Posistiveness of current matrix. More... | |
Static Protected Attributes inherited from TPZMatrix< TVar > | |
static TVar | gZero |
Initializing value to static variable. More... | |
Implements a skyline storage format to parallelized process. Matrix.
Definition at line 35 of file pzskylmatpar.h.
TPZSkylParMatrix< TVar >::TPZSkylParMatrix | ( | ) |
Default constructor.
Definition at line 69 of file pzskylmatpar.cpp.
TPZSkylParMatrix< TVar >::TPZSkylParMatrix | ( | const int64_t | dim | ) |
Constructor for given dimension.
TPZSkylParMatrix< TVar >::TPZSkylParMatrix | ( | const int64_t | dim, |
const TPZVec< int64_t > & | skyline, | ||
int | NumThreads | ||
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Constructor with number of threads.
Initializing number of iterations to Template SUM.
Definition at line 44 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, and TPZSkylParMatrix< TVar >::fSkyline.
TPZSkylParMatrix< TVar >::TPZSkylParMatrix | ( | const TPZSkylParMatrix< TVar > & | A | ) |
Copy constructor.
Definition at line 62 of file pzskylmatpar.cpp.
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Default destructor.
Definition at line 84 of file pzskylmatpar.cpp.
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Define the class id associated with the class.
This id has to be unique for all classes A non unique id is flagged at the startup of the program
Reimplemented from TPZSkylMatrix< TVar >.
Definition at line 831 of file pzskylmatpar.cpp.
References TPZSkylMatrix< TVar >::ClassId(), and Hash().
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Determine which column can be decomposed with respect to which column.
Definition at line 117 of file pzskylmatpar.cpp.
References TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, and TPZSkylParMatrix< TVar >::fThreadUsed.
Referenced by TPZSkylParMatrix< TVar >::ParallelCholesky(), TPZSkylParMatrix< TVar >::ParallelLDLt(), and TPZSkylParMatrix< TVar >::ParallelLDLt2().
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Determine which column has some equations to decompose.
Definition at line 144 of file pzskylmatpar.cpp.
References DebugStop, TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fColUsed, TPZSkylParMatrix< TVar >::fDec, LOGPZ_DEBUG, and LOGPZ_ERROR.
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Decomposes the current matrix using Cholesky method.
singular |
Reimplemented from TPZSkylMatrix< TVar >.
Definition at line 368 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::fCorrectSingular, and TPZSkylParMatrix< TVar >::fSingular.
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Decomposes the current matrix using Cholesky method. The current matrix has to be symmetric.
Reimplemented from TPZSkylMatrix< TVar >.
Definition at line 379 of file pzskylmatpar.cpp.
References TPZMatrix< TVar >::Dim(), ECholesky, TPZSkylParMatrix< TVar >::fDec, TPZMatrix< TVar >::fDecomposed, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fSingular, TPZSkylParMatrix< TVar >::fSkyline, TPZSkylParMatrix< TVar >::fThreadUsed, LOGPZ_WARN, TPZSkylParMatrix< TVar >::ParallelCholesky(), PZ_PTHREAD_CREATE, PZ_PTHREAD_JOIN, and test::res.
Referenced by TPZSkylParMatrix< TVar >::Decompose_Cholesky().
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Decomposes the current matrix using LDLt.
The current matrix has to be symmetric. "L" is lower triangular with 1.0 in its diagonal and "D" is a Diagonal matrix.
Reimplemented from TPZSkylMatrix< TVar >.
Definition at line 442 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::fCorrectSingular, and TPZSkylParMatrix< TVar >::fSingular.
Referenced by TPZSkylParMatrix< TVar >::main_nada().
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Decomposes the current matrix using LDLt.
Reimplemented from TPZSkylMatrix< TVar >.
Definition at line 453 of file pzskylmatpar.cpp.
References TPZMatrix< TVar >::Dim(), ELDLt, TPZSkylParMatrix< TVar >::fDec, TPZMatrix< TVar >::fDecomposed, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fNumDecomposed, TPZSkylParMatrix< TVar >::fSkyline, TPZSkylParMatrix< TVar >::fThreadUsed, nthreads, TPZSkylParMatrix< TVar >::ParallelLDLt2(), PZ_PTHREAD_CREATE, PZ_PTHREAD_JOIN, and test::res.
Referenced by TPZSkylParMatrix< TVar >::Decompose_LDLt().
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Definition at line 524 of file pzskylmatpar.cpp.
References ddot_(), DebugStop, TPZSkylMatrix< TVar >::Diag(), TPZSkylParMatrix< TVar >::fCorrectSingular, TPZSkylParMatrix< TVar >::fSingular, IsZero(), TPZSkylMatrix< TVar >::SkyHeight(), and sqrt.
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Definition at line 518 of file pzskylmatpar.cpp.
References DebugStop.
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Definition at line 603 of file pzskylmatpar.cpp.
References TPZSkylMatrix< TVar >::Diag(), TPZSkylMatrix< TVar >::fElem, LOGPZ_DEBUG, and TPZSkylMatrix< TVar >::SkyHeight().
Referenced by TPZSkylParMatrix< TVar >::ParallelLDLt().
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Definition at line 657 of file pzskylmatpar.cpp.
References TPZSkylMatrix< TVar >::Diag(), fabs, TPZSkylParMatrix< TVar >::fCorrectSingular, TPZSkylParMatrix< TVar >::fDec, TPZSkylMatrix< TVar >::fElem, TPZSkylParMatrix< TVar >::fSingular, LOGPZ_DEBUG, and TPZSkylMatrix< TVar >::SkyHeight().
Referenced by TPZSkylParMatrix< TVar >::ParallelLDLt2().
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Static main for testing.
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Definition at line 720 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylMatrix< TVar >::Decompose_LDLt(), stats::filename, nthreads, TPZMatrix< TVar >::Print(), and tempo.
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Definition at line 186 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylMatrix< TVar >::DecomposeColumn(), TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fCorrectSingular, TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fSingular, TPZSkylParMatrix< TVar >::fThreadUsed, PZ_PTHREAD_COND_BROADCAST, PZ_PTHREAD_COND_SIGNAL, PZ_PTHREAD_COND_WAIT, PZ_PTHREAD_MUTEX_LOCK, and PZ_PTHREAD_MUTEX_UNLOCK.
Referenced by TPZSkylParMatrix< TVar >::Decompose_Cholesky().
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Definition at line 255 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::DecomposeColumnLDLt(), TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fThreadUsed, PZ_PTHREAD_COND_BROADCAST, PZ_PTHREAD_COND_SIGNAL, PZ_PTHREAD_COND_WAIT, PZ_PTHREAD_MUTEX_LOCK, and PZ_PTHREAD_MUTEX_UNLOCK.
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Definition at line 317 of file pzskylmatpar.cpp.
References TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::DecomposeColumnLDLt2(), TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fColUsed, TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fNumDecomposed, PZ_PTHREAD_COND_BROADCAST, PZ_PTHREAD_COND_SIGNAL, PZ_PTHREAD_COND_WAIT, PZ_PTHREAD_MUTEX_LOCK, and PZ_PTHREAD_MUTEX_UNLOCK.
Referenced by TPZSkylParMatrix< TVar >::Decompose_LDLt().
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Definition at line 99 of file pzskylmatpar.cpp.
References TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fNthreads, TPZSkylParMatrix< TVar >::fSingular, and TPZSkylParMatrix< TVar >::fThreadUsed.
void TPZSkylParMatrix< TVar >::SetSkyline | ( | const TPZVec< int64_t > & | skyline | ) |
Definition at line 88 of file pzskylmatpar.cpp.
References TPZMatrix< TVar >::Dim(), TPZSkylParMatrix< TVar >::fCorrectSingular, TPZSkylParMatrix< TVar >::fDec, TPZSkylParMatrix< TVar >::fEqDec, TPZSkylParMatrix< TVar >::fSkyline, and TPZSkylMatrix< TVar >::SetSkyline().
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Definition at line 97 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::ColumnToWork(), and TPZSkylParMatrix< TVar >::ParallelLDLt2().
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Definition at line 99 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::DecomposeColumnCholesky(), TPZSkylParMatrix< TVar >::DecomposeColumnLDLt2(), TPZSkylParMatrix< TVar >::ParallelCholesky(), and TPZSkylParMatrix< TVar >::SetSkyline().
TPZVec<int> TPZSkylParMatrix< TVar >::fDec |
Definition at line 91 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::DecomposeColumnLDLt2(), TPZSkylParMatrix< TVar >::ParallelCholesky(), TPZSkylParMatrix< TVar >::ParallelLDLt(), TPZSkylParMatrix< TVar >::ParallelLDLt2(), TPZSkylParMatrix< TVar >::PrintState(), TPZSkylParMatrix< TVar >::SetSkyline(), and TPZSkylParMatrix< TVar >::TPZSkylParMatrix().
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Definition at line 95 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::ParallelCholesky(), TPZSkylParMatrix< TVar >::ParallelLDLt(), TPZSkylParMatrix< TVar >::PrintState(), TPZSkylParMatrix< TVar >::SetSkyline(), and TPZSkylParMatrix< TVar >::TPZSkylParMatrix().
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Definition at line 95 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::ParallelCholesky(), TPZSkylParMatrix< TVar >::ParallelLDLt(), TPZSkylParMatrix< TVar >::ParallelLDLt2(), TPZSkylParMatrix< TVar >::PrintState(), and TPZSkylParMatrix< TVar >::TPZSkylParMatrix().
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Definition at line 98 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::Decompose_LDLt(), and TPZSkylParMatrix< TVar >::ParallelLDLt2().
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Definition at line 100 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::DecomposeColumnCholesky(), TPZSkylParMatrix< TVar >::DecomposeColumnLDLt2(), TPZSkylParMatrix< TVar >::ParallelCholesky(), and TPZSkylParMatrix< TVar >::PrintState().
TPZVec<int64_t> TPZSkylParMatrix< TVar >::fSkyline |
Definition at line 92 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::SetSkyline(), and TPZSkylParMatrix< TVar >::TPZSkylParMatrix().
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Definition at line 96 of file pzskylmatpar.h.
Referenced by TPZSkylParMatrix< TVar >::ColumnToWork(), TPZSkylParMatrix< TVar >::Decompose_Cholesky(), TPZSkylParMatrix< TVar >::Decompose_LDLt(), TPZSkylParMatrix< TVar >::ParallelCholesky(), TPZSkylParMatrix< TVar >::ParallelLDLt(), and TPZSkylParMatrix< TVar >::PrintState().